Archive for the 'Programming' Category

Hosting Applets in Google Docs

Friday, January 22nd, 2010

Google Docs recently added support for uploading arbitrary files (up to 250MB large). Can this be used to host Java applets?

GTAC 2008

Thursday, October 23rd, 2008

Here are my take-away notes from the first day of the Google Testing and Automation Conference.

Manning Books in Safari Books

Thursday, June 19th, 2008

Over the last few days several books from Manning Publications appear to have been added to Safari Books.

No Fluff Just Stuff

Sunday, April 20th, 2008

Spent this weekend at the Spring 2008 Pacific Northwest Software Symposium. Here are my notes (trimmed down to whatever I felt was new & noteworthy to me) and some general comments about the event.

Using Java to Read Excel Files

Thursday, February 14th, 2008

I recently needed to add support for extracting data from Excel files (which are still ubiquitous in labs) to a Java application.

Some Java Benchmarks

Saturday, September 29th, 2007

During the last two weeks I ran some tests to answer a few questions that had been accumulating:

  1. Should I disable hyper-threading (ht)?
  2. How much does doubling the available memory improve performance?
  3. Mirror, mirror on the wall, who has the fastest JVM of them all?

No GPL?

Friday, September 7th, 2007

It’s not uncommon for organizations to have strict policies regarding the use of GPLed code, due to the somewhat viral nature of this license.

Hiring

Tuesday, June 26th, 2007

In the latest effort to make myself obsolete by the end of this year, we are looking for a software developer to help us better make our data available to both humans and machines. The main responsibilities of this position will be the further development of the UniProt web site and the UniProt RDF distribution.

Source Code Visualization

Wednesday, June 6th, 2007

My colleagues regularly ask me if I couldn’t provide them with some graphic view of my code, looking at source code is so tedious etc. I’ve looked at various UML tools in the past, but never managed to get any truly useful visualization out of any of them. But maybe the problem with UML is that it’s so limited to two dimensions? Enter Relief, a tool that visualizes code in three dimensions!

EMBRACE Talk

Friday, June 1st, 2007

Gave a brief talk about programmatic access to beta.uniprot.org at the EMBRACE workshop in Geneva today.